Protein–RNA interactions for Protein: P43321

SMD3, Small nuclear ribonucleoprotein Sm D3, yeastyeast

Known RBP Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD3P43321 TRM5YHR070W 1500 nt8.88□□□□□ -0.99
SMD3P43321 GAL1YBR020W 1587 nt8.87□□□□□ -0.99
SMD3P43321 DUS1YML080W 1272 nt8.87□□□□□ -0.99
SMD3P43321 BIO5YNR056C 1686 nt8.86□□□□□ -0.99
SMD3P43321 YDL086C-AYDL086C-A 435 nt8.86□□□□□ -0.99
SMD3P43321 PUS2YGL063W 1113 nt8.85□□□□□ -0.99
SMD3P43321 YCL074WYCL074W 927 nt8.84□□□□□ -0.99
SMD3P43321 YGR259CYGR259C 441 nt8.84□□□□□ -0.99
SMD3P43321 SNF1YDR477W 1902 nt8.84□□□□□ -1
SMD3P43321 FRD1YEL047C 1413 nt8.83□□□□□ -1
SMD3P43321 IRC24YIR036C 792 nt8.82□□□□□ -1
SMD3P43321 DIC1YLR348C 897 nt8.82□□□□□ -1
SMD3P43321 CYT2YKL087C 675 nt8.81□□□□□ -1
SMD3P43321 YKR040CYKR040C 504 nt8.81□□□□□ -1
SMD3P43321 ANP1YEL036C 1503 nt8.8□□□□□ -1
SMD3P43321 ERV46YAL042W 1248 nt8.8□□□□□ -1
SMD3P43321 MIC12YBR262C 321 nt8.79□□□□□ -1
SMD3P43321 PBP1YGR178C 2169 nt8.78□□□□□ -1
SMD3P43321 AQY1YPR192W 918 nt8.78□□□□□ -1
SMD3P43321 AGP1YCL025C 1902 nt8.76□□□□□ -1.01
SMD3P43321 HHO1YPL127C 777 nt8.76□□□□□ -1.01
SMD3P43321 LPX1YOR084W 1164 nt8.75□□□□□ -1.01
SMD3P43321 YDR524C-BYDR524C-B 201 nt8.73□□□□□ -1.01
SMD3P43321 Q0182Q0182 405 nt8.73□□□□□ -1.01
SMD3P43321 YPR011CYPR011C 981 nt8.73□□□□□ -1.01
SMD3P43321 STB1YNL309W 1263 nt8.71□□□□□ -1.02
SMD3P43321 CMP2YML057W 1815 nt8.7□□□□□ -1.02
SMD3P43321 FEN2YCR028C 1539 nt8.7□□□□□ -1.02
SMD3P43321 GPI16YHR188C 1833 nt8.69□□□□□ -1.02
SMD3P43321 SPC25YER018C 666 nt8.69□□□□□ -1.02
SMD3P43321 YGR201CYGR201C 678 nt8.66□□□□□ -1.02
SMD3P43321 tM(CAU)CtM(CAU)C 72 nt8.64□□□□□ -1.03
SMD3P43321 IMT4tM(CAU)E 72 nt8.64□□□□□ -1.03
SMD3P43321 IMT3tM(CAU)J3 72 nt8.64□□□□□ -1.03
SMD3P43321 IMT1tM(CAU)O1 72 nt8.64□□□□□ -1.03
SMD3P43321 IMT2tM(CAU)P 72 nt8.64□□□□□ -1.03
SMD3P43321 YIR016WYIR016W 798 nt8.64□□□□□ -1.03
SMD3P43321 HSL7YBR133C 2484 nt8.64□□□□□ -1.03
SMD3P43321 RDN18-1RDN18-1 1800 nt8.61□□□□□ -1.03
SMD3P43321 RDN18-2RDN18-2 1800 nt8.61□□□□□ -1.03
SMD3P43321 STR3YGL184C 1398 nt8.61□□□□□ -1.03
SMD3P43321 XDJ1YLR090W 1380 nt8.61□□□□□ -1.03
SMD3P43321 VPS60YDR486C 690 nt8.6□□□□□ -1.03
SMD3P43321 YLR179CYLR179C 606 nt8.6□□□□□ -1.03
SMD3P43321 TIM23YNR017W 669 nt8.6□□□□□ -1.03
SMD3P43321 AQY2YLL052C 450 nt8.58□□□□□ -1.04
SMD3P43321 YLR235CYLR235C 399 nt8.58□□□□□ -1.04
SMD3P43321 CCT4YDL143W 1587 nt8.57□□□□□ -1.04
SMD3P43321 SWC5YBR231C 912 nt8.57□□□□□ -1.04
SMD3P43321 NDI1YML120C 1542 nt8.56□□□□□ -1.04
SMD3P43321 RTN2YDL204W 1182 nt8.56□□□□□ -1.04
SMD3P43321 PTH1YHR189W 573 nt8.56□□□□□ -1.04
SMD3P43321 GOR1YNL274C 1053 nt8.55□□□□□ -1.04
SMD3P43321 YAT1YAR035W 2064 nt8.53□□□□□ -1.04
SMD3P43321 ALG3YBL082C 1377 nt8.52□□□□□ -1.05
SMD3P43321 AVT6YER119C 1347 nt8.52□□□□□ -1.05
SMD3P43321 DUT1YBR252W 444 nt8.51□□□□□ -1.05
SMD3P43321 GDH3YAL062W 1374 nt8.49□□□□□ -1.05
SMD3P43321 AHT1YHR093W 549 nt8.49□□□□□ -1.05
SMD3P43321 HEL2YDR266C 1920 nt8.47□□□□□ -1.05
SMD3P43321 RDN25-1RDN25-1 3396 nt8.47□□□□□ -1.05
SMD3P43321 RDN25-2RDN25-2 3396 nt8.47□□□□□ -1.05
SMD3P43321 YPR064WYPR064W 420 nt8.45□□□□□ -1.06
SMD3P43321 SPT20YOL148C 1815 nt8.45□□□□□ -1.06
SMD3P43321 INA1YLR413W 2028 nt8.42□□□□□ -1.06
SMD3P43321 YKL030WYKL030W 606 nt8.39□□□□□ -1.07
SMD3P43321 ALD4YOR374W 1560 nt8.36□□□□□ -1.07
SMD3P43321 HIF1YLL022C 1158 nt8.36□□□□□ -1.07
SMD3P43321 TAD3YLR316C 969 nt8.35□□□□□ -1.07
SMD3P43321 PLB1YMR008C 1995 nt8.33□□□□□ -1.08
SMD3P43321 RPC82YPR190C 1965 nt8.33□□□□□ -1.08
SMD3P43321 SPP1YPL138C 1062 nt8.32□□□□□ -1.08
SMD3P43321 SHM2YLR058C 1410 nt8.31□□□□□ -1.08
SMD3P43321 RPM1RPM1 483 nt8.31□□□□□ -1.08
SMD3P43321 PRM5YIL117C 957 nt8.3□□□□□ -1.08
SMD3P43321 TIM17YJL143W 477 nt8.3□□□□□ -1.08
SMD3P43321 DAT1YML113W 747 nt8.29□□□□□ -1.08
SMD3P43321 ARP6YLR085C 1317 nt8.29□□□□□ -1.08
SMD3P43321 YLR415CYLR415C 339 nt8.28□□□□□ -1.08
SMD3P43321 YCR102CYCR102C 1107 nt8.26□□□□□ -1.09
SMD3P43321 NBP35YGL091C 987 nt8.25□□□□□ -1.09
SMD3P43321 SAM35YHR083W 990 nt8.24□□□□□ -1.09
SMD3P43321 MOT3YMR070W 1473 nt8.24□□□□□ -1.09
SMD3P43321 MET2YNL277W 1461 nt8.24□□□□□ -1.09
SMD3P43321 ZRT3YKL175W 1512 nt8.24□□□□□ -1.09
SMD3P43321 BDH1YAL060W 1149 nt8.23□□□□□ -1.09
SMD3P43321 RIM8YGL045W 1629 nt8.22□□□□□ -1.09
SMD3P43321 NIT1YIL164C 600 nt8.19□□□□□ -1.1
SMD3P43321 UTR1YJR049C 1593 nt8.18□□□□□ -1.1
SMD3P43321 SFP1YLR403W 2052 nt8.17□□□□□ -1.1
SMD3P43321 YGL114WYGL114W 2178 nt8.15□□□□□ -1.1
SMD3P43321 MUP1YGR055W 1725 nt8.15□□□□□ -1.1
SMD3P43321 SGT2YOR007C 1041 nt8.15□□□□□ -1.1
SMD3P43321 MAE1YKL029C 2010 nt8.14□□□□□ -1.11
SMD3P43321 GAP1YKR039W 1809 nt8.13□□□□□ -1.11
SMD3P43321 tL(GAG)GtL(GAG)G 82 nt8.13□□□□□ -1.11
SMD3P43321 LSC2YGR244C 1284 nt8.13□□□□□ -1.11
SMD3P43321 YJL067WYJL067W 351 nt8.1□□□□□ -1.11
SMD3P43321 TIR3YIL011W 810 nt8.09□□□□□ -1.11
SMD3P43321 YSP3YOR003W 1437 nt8.09□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 11.9 ms