Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V0CP27449 ABCB10P3-201ENST00000561950 2166 ntBASIC22.35■■□□□ 1.17
ATP6V0CP27449 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP6V0CP27449 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP6V0CP27449 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
ATP6V0CP27449 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
ATP6V0CP27449 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.32■■□□□ 1.16
ATP6V0CP27449 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP6V0CP27449 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP6V0CP27449 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ATP6V0CP27449 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP6V0CP27449 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP6V0CP27449 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP6V0CP27449 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP6V0CP27449 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP6V0CP27449 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.3■■□□□ 1.16
ATP6V0CP27449 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ATP6V0CP27449 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V0CP27449 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V0CP27449 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V0CP27449 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.28■■□□□ 1.16
ATP6V0CP27449 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V0CP27449 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP6V0CP27449 AL161658.1-201ENST00000623641 1967 ntBASIC22.27■■□□□ 1.15
ATP6V0CP27449 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATP6V0CP27449 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP6V0CP27449 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP6V0CP27449 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATP6V0CP27449 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP6V0CP27449 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V0CP27449 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.22■■□□□ 1.15
ATP6V0CP27449 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V0CP27449 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V0CP27449 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V0CP27449 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V0CP27449 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0CP27449 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0CP27449 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0CP27449 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0CP27449 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0CP27449 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0CP27449 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0CP27449 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
ATP6V0CP27449 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0CP27449 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
ATP6V0CP27449 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC22.12■■□□□ 1.13
ATP6V0CP27449 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0CP27449 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
ATP6V0CP27449 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.1■■□□□ 1.13
ATP6V0CP27449 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V0CP27449 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.09■■□□□ 1.13
ATP6V0CP27449 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V0CP27449 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V0CP27449 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0CP27449 AC139426.1-201ENST00000568218 2529 ntBASIC22.06■■□□□ 1.12
ATP6V0CP27449 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6V0CP27449 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6V0CP27449 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0CP27449 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
ATP6V0CP27449 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0CP27449 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0CP27449 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
ATP6V0CP27449 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.03■■□□□ 1.12
ATP6V0CP27449 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0CP27449 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0CP27449 AC120057.4-201ENST00000624722 1615 ntBASIC22■■□□□ 1.11
ATP6V0CP27449 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0CP27449 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0CP27449 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.98■■□□□ 1.11
ATP6V0CP27449 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
ATP6V0CP27449 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V0CP27449 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ATP6V0CP27449 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V0CP27449 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V0CP27449 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V0CP27449 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
ATP6V0CP27449 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP6V0CP27449 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.91■■□□□ 1.1
ATP6V0CP27449 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP6V0CP27449 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP6V0CP27449 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP6V0CP27449 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
ATP6V0CP27449 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.9■■□□□ 1.1
ATP6V0CP27449 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.89■■□□□ 1.1
ATP6V0CP27449 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0CP27449 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0CP27449 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0CP27449 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0CP27449 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0CP27449 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0CP27449 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0CP27449 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ATP6V0CP27449 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0CP27449 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
ATP6V0CP27449 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V0CP27449 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V0CP27449 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V0CP27449 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V0CP27449 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.82■■□□□ 1.08
ATP6V0CP27449 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms