Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV3D-7A0A0C4DH55 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV3D-7A0A0C4DH55 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV3D-7A0A0C4DH55 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV3D-7A0A0C4DH55 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV3D-7A0A0C4DH55 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
IGKV3D-7A0A0C4DH55 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV3D-7A0A0C4DH55 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
IGKV3D-7A0A0C4DH55 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IGKV3D-7A0A0C4DH55 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-7A0A0C4DH55 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IGKV3D-7A0A0C4DH55 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IGKV3D-7A0A0C4DH55 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IGKV3D-7A0A0C4DH55 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IGKV3D-7A0A0C4DH55 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
IGKV3D-7A0A0C4DH55 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
IGKV3D-7A0A0C4DH55 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGKV3D-7A0A0C4DH55 ABCB10P3-201ENST00000561950 2166 ntBASIC17.47■□□□□ 0.39
IGKV3D-7A0A0C4DH55 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV3D-7A0A0C4DH55 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV3D-7A0A0C4DH55 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.47■□□□□ 0.39
IGKV3D-7A0A0C4DH55 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.46■□□□□ 0.39
IGKV3D-7A0A0C4DH55 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV3D-7A0A0C4DH55 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGKV3D-7A0A0C4DH55 AC135731.1-201ENST00000569415 2548 ntBASIC17.45■□□□□ 0.38
IGKV3D-7A0A0C4DH55 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV3D-7A0A0C4DH55 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV3D-7A0A0C4DH55 ILK-212ENST00000532063 1617 ntTSL 2 BASIC17.44■□□□□ 0.38
IGKV3D-7A0A0C4DH55 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV3D-7A0A0C4DH55 ABCB10P1-201ENST00000614297 2181 ntBASIC17.43■□□□□ 0.38
IGKV3D-7A0A0C4DH55 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV3D-7A0A0C4DH55 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV3D-7A0A0C4DH55 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV3D-7A0A0C4DH55 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IGKV3D-7A0A0C4DH55 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
IGKV3D-7A0A0C4DH55 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV3D-7A0A0C4DH55 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV3D-7A0A0C4DH55 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3D-7A0A0C4DH55 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3D-7A0A0C4DH55 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3D-7A0A0C4DH55 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3D-7A0A0C4DH55 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IGKV3D-7A0A0C4DH55 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC17.35■□□□□ 0.37
IGKV3D-7A0A0C4DH55 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-7A0A0C4DH55 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-7A0A0C4DH55 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-7A0A0C4DH55 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-7A0A0C4DH55 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV3D-7A0A0C4DH55 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV3D-7A0A0C4DH55 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV3D-7A0A0C4DH55 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV3D-7A0A0C4DH55 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV3D-7A0A0C4DH55 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-7A0A0C4DH55 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-7A0A0C4DH55 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-7A0A0C4DH55 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-7A0A0C4DH55 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV3D-7A0A0C4DH55 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-7A0A0C4DH55 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-7A0A0C4DH55 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IGKV3D-7A0A0C4DH55 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV3D-7A0A0C4DH55 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV3D-7A0A0C4DH55 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV3D-7A0A0C4DH55 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV3D-7A0A0C4DH55 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.26■□□□□ 0.35
IGKV3D-7A0A0C4DH55 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV3D-7A0A0C4DH55 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV3D-7A0A0C4DH55 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV3D-7A0A0C4DH55 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC17.24■□□□□ 0.35
IGKV3D-7A0A0C4DH55 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-7A0A0C4DH55 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-7A0A0C4DH55 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
IGKV3D-7A0A0C4DH55 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
IGKV3D-7A0A0C4DH55 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-7A0A0C4DH55 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-7A0A0C4DH55 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.22■□□□□ 0.35
IGKV3D-7A0A0C4DH55 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IGKV3D-7A0A0C4DH55 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV3D-7A0A0C4DH55 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV3D-7A0A0C4DH55 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
IGKV3D-7A0A0C4DH55 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV3D-7A0A0C4DH55 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IGKV3D-7A0A0C4DH55 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.18■□□□□ 0.34
IGKV3D-7A0A0C4DH55 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3D-7A0A0C4DH55 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3D-7A0A0C4DH55 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3D-7A0A0C4DH55 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-7A0A0C4DH55 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.15■□□□□ 0.34
IGKV3D-7A0A0C4DH55 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-7A0A0C4DH55 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
IGKV3D-7A0A0C4DH55 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV3D-7A0A0C4DH55 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV3D-7A0A0C4DH55 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV3D-7A0A0C4DH55 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.12■□□□□ 0.33
IGKV3D-7A0A0C4DH55 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV3D-7A0A0C4DH55 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV3D-7A0A0C4DH55 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV3D-7A0A0C4DH55 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
IGKV3D-7A0A0C4DH55 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV3D-7A0A0C4DH55 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms