Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SLF1Q9BQI6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.23■□□□□ 0.19
SLF1Q9BQI6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLF1Q9BQI6 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.23■□□□□ 0.19
SLF1Q9BQI6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 CTBP2P8-201ENST00000422584 1330 ntBASIC16.22■□□□□ 0.19
SLF1Q9BQI6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 AC093826.1-201ENST00000508655 993 ntBASIC16.22■□□□□ 0.19
SLF1Q9BQI6 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 AL451007.2-201ENST00000632004 563 ntBASIC16.22■□□□□ 0.19
SLF1Q9BQI6 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLF1Q9BQI6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 CICP16-201ENST00000502609 2813 ntBASIC16.21■□□□□ 0.19
SLF1Q9BQI6 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 BCAS2P2-201ENST00000425064 674 ntBASIC16.21■□□□□ 0.19
SLF1Q9BQI6 STK24P1-201ENST00000455035 1291 ntBASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AC006529.1-201ENST00000459978 637 ntBASIC16.21■□□□□ 0.19
SLF1Q9BQI6 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AL031673.1-201ENST00000611460 466 ntBASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AC011471.3-201ENST00000623576 402 ntBASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLF1Q9BQI6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLF1Q9BQI6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.21■□□□□ 0.18
SLF1Q9BQI6 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.21■□□□□ 0.18
SLF1Q9BQI6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLF1Q9BQI6 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.21■□□□□ 0.18
SLF1Q9BQI6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLF1Q9BQI6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLF1Q9BQI6 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms