Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CEP164P1-201ENST00000455142 418 ntBASIC12.26□□□□□ -0.45
TMEM54Q969K7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 NDUFS6P1-201ENST00000485187 316 ntBASIC12.26□□□□□ -0.45
TMEM54Q969K7 RN7SL720P-201ENST00000488178 304 ntBASIC12.26□□□□□ -0.45
TMEM54Q969K7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 PYY2-201ENST00000315776 282 ntBASIC12.25□□□□□ -0.45
TMEM54Q969K7 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 AL627231.1-201ENST00000394467 1125 ntBASIC12.25□□□□□ -0.45
TMEM54Q969K7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 GGTLC4P-201ENST00000402176 664 ntBASIC12.25□□□□□ -0.45
TMEM54Q969K7 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 AC234782.1-201ENST00000451950 919 ntBASIC12.25□□□□□ -0.45
TMEM54Q969K7 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 AP005264.5-201ENST00000590066 467 ntBASIC12.25□□□□□ -0.45
TMEM54Q969K7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.25□□□□□ -0.45
TMEM54Q969K7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 MKRN5P-201ENST00000445263 1467 ntBASIC12.25□□□□□ -0.45
TMEM54Q969K7 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 AC019109.1-201ENST00000401725 1874 ntBASIC12.25□□□□□ -0.45
TMEM54Q969K7 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TMEM54Q969K7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
TMEM54Q969K7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms