Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 RPL13AP3-202ENST00000494676 1473 ntBASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 PTPRVP-205ENST00000641549 5067 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 KRT18P15-201ENST00000458108 1291 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 RN7SL181P-201ENST00000462921 277 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AC005740.1-201ENST00000515639 522 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AP002803.1-201ENST00000528836 498 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 NDUFB10P1-201ENST00000567319 521 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 RN7SL665P-201ENST00000578793 300 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AC007881.3-201ENST00000608897 607 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 LINC02486-201ENST00000604157 3000 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 AC027612.1-201ENST00000445234 2395 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 PCDHA5-203ENST00000614258 4248 ntBASIC13.79□□□□□ -0.2
TRIM48Q8IWZ4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 AC067931.2-201ENST00000623655 2003 ntBASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRIM48Q8IWZ4 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms