Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 AC003686.1-201ENST00000550956 1034 ntBASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 AC106886.1-201ENST00000568660 600 ntBASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 RCC2P1-201ENST00000452257 1476 ntBASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 ANKRD19P-201ENST00000338192 862 ntBASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 YBX1P6-201ENST00000442962 1002 ntBASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AC021723.1-201ENST00000486306 515 ntBASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AC008805.1-201ENST00000590892 364 ntBASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 LINC02084-201ENST00000606069 1096 ntBASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AL162274.1-201ENST00000617191 1098 ntBASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 CR392039.2-201ENST00000623182 509 ntBASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AHCYP4-201ENST00000419201 1315 ntBASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 LINC00115-201ENST00000473798 1317 ntBASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CCDC50Q8IVM0 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 AC018629.1-201ENST00000623381 1736 ntBASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 AC103592.1-201ENST00000394513 664 ntBASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 KRT18P36-201ENST00000411618 1276 ntBASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 HLA-V-201ENST00000429037 534 ntBASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 OR2R1P-201ENST00000441404 914 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms