Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 FAM21FP-201ENST00000426241 1131 ntBASIC13.47□□□□□ -0.25
RFTN2Q52LD8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 GOLGA2P4-201ENST00000441462 777 ntBASIC13.47□□□□□ -0.25
RFTN2Q52LD8 HILS1-202ENST00000545329 423 ntBASIC13.47□□□□□ -0.25
RFTN2Q52LD8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 RN7SL163P-201ENST00000583100 276 ntBASIC13.47□□□□□ -0.25
RFTN2Q52LD8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 AC133552.6-201ENST00000613406 534 ntBASIC13.47□□□□□ -0.25
RFTN2Q52LD8 COX11-210ENST00000639671 696 ntBASIC13.47□□□□□ -0.25
RFTN2Q52LD8 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 AL031719.1-201ENST00000623365 2587 ntBASIC13.47□□□□□ -0.25
RFTN2Q52LD8 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 BTBD6P1-201ENST00000412176 1267 ntBASIC13.46□□□□□ -0.25
RFTN2Q52LD8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 KRT223P-202ENST00000449164 1292 ntBASIC13.46□□□□□ -0.25
RFTN2Q52LD8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 RNA5SP412-201ENST00000516234 123 ntBASIC13.46□□□□□ -0.25
RFTN2Q52LD8 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 AC093752.3-201ENST00000567343 901 ntBASIC13.46□□□□□ -0.25
RFTN2Q52LD8 RN7SL560P-201ENST00000577943 264 ntBASIC13.46□□□□□ -0.25
RFTN2Q52LD8 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 AL161773.1-201ENST00000624845 863 ntBASIC13.46□□□□□ -0.25
RFTN2Q52LD8 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RFTN2Q52LD8 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 DLX4-206ENST00000611342 1662 ntBASIC13.46□□□□□ -0.26
RFTN2Q52LD8 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RFTN2Q52LD8 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
RFTN2Q52LD8 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFTN2Q52LD8 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFTN2Q52LD8 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFTN2Q52LD8 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFTN2Q52LD8 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFTN2Q52LD8 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.45□□□□□ -0.26
RFTN2Q52LD8 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFTN2Q52LD8 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms