Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.34■□□□□ 0.21
IRX3P78415 AC013553.1-201ENST00000560906 267 ntBASIC16.34■□□□□ 0.21
IRX3P78415 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 AC006483.2-201ENST00000609813 515 ntBASIC16.34■□□□□ 0.21
IRX3P78415 AC091769.1-201ENST00000619576 568 ntBASIC16.34■□□□□ 0.21
IRX3P78415 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.34■□□□□ 0.21
IRX3P78415 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
IRX3P78415 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IRX3P78415 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
IRX3P78415 AC138969.2-201ENST00000532739 9932 ntBASIC16.33■□□□□ 0.21
IRX3P78415 AC232323.1-201ENST00000540724 2099 ntBASIC16.33■□□□□ 0.21
IRX3P78415 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IRX3P78415 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX3P78415 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 AP000354.1-201ENST00000396982 456 ntBASIC16.33■□□□□ 0.2
IRX3P78415 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX3P78415 AC006529.1-201ENST00000459978 637 ntBASIC16.33■□□□□ 0.2
IRX3P78415 PRSS3P1-201ENST00000503996 742 ntBASIC16.33■□□□□ 0.2
IRX3P78415 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.33■□□□□ 0.2
IRX3P78415 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.33■□□□□ 0.2
IRX3P78415 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IRX3P78415 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.33■□□□□ 0.2
IRX3P78415 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 PDXDC2P-206ENST00000534700 1315 ntBASIC16.33■□□□□ 0.2
IRX3P78415 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 AC007952.5-201ENST00000572818 1486 ntBASIC16.33■□□□□ 0.2
IRX3P78415 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX3P78415 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IRX3P78415 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX3P78415 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.33■□□□□ 0.2
IRX3P78415 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX3P78415 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.32■□□□□ 0.2
IRX3P78415 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.32■□□□□ 0.2
IRX3P78415 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX3P78415 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
IRX3P78415 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX3P78415 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX3P78415 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX3P78415 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
IRX3P78415 AC244197.1-201ENST00000456494 951 ntBASIC16.32■□□□□ 0.2
IRX3P78415 RPL13AP3-202ENST00000494676 1473 ntBASIC16.32■□□□□ 0.2
IRX3P78415 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 AC090136.2-201ENST00000517809 420 ntBASIC16.32■□□□□ 0.2
IRX3P78415 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.32■□□□□ 0.2
IRX3P78415 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
IRX3P78415 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX3P78415 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX3P78415 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX3P78415 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX3P78415 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX3P78415 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.32■□□□□ 0.2
IRX3P78415 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms