Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.19□□□□□ -0.46
UBA52P62987 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.19□□□□□ -0.46
UBA52P62987 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.19□□□□□ -0.46
UBA52P62987 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
UBA52P62987 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.19□□□□□ -0.46
UBA52P62987 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.19□□□□□ -0.46
UBA52P62987 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.19□□□□□ -0.46
UBA52P62987 PPY2P-201ENST00000582808 702 ntBASIC12.19□□□□□ -0.46
UBA52P62987 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.19□□□□□ -0.46
UBA52P62987 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.19□□□□□ -0.46
UBA52P62987 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.19□□□□□ -0.46
UBA52P62987 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.19□□□□□ -0.46
UBA52P62987 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
UBA52P62987 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
UBA52P62987 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
UBA52P62987 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
UBA52P62987 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.18□□□□□ -0.46
UBA52P62987 MAPK10-262ENST00000641051 5738 ntBASIC12.18□□□□□ -0.46
UBA52P62987 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.18□□□□□ -0.46
UBA52P62987 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
UBA52P62987 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.18□□□□□ -0.46
UBA52P62987 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.18□□□□□ -0.46
UBA52P62987 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
UBA52P62987 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.18□□□□□ -0.46
UBA52P62987 RN7SL769P-201ENST00000469386 295 ntBASIC12.18□□□□□ -0.46
UBA52P62987 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.18□□□□□ -0.46
UBA52P62987 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.18□□□□□ -0.46
UBA52P62987 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.18□□□□□ -0.46
UBA52P62987 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.18□□□□□ -0.46
UBA52P62987 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
UBA52P62987 CU633904.3-201ENST00000624042 1029 ntBASIC12.18□□□□□ -0.46
UBA52P62987 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UBA52P62987 AC015819.3-201ENST00000624305 2674 ntBASIC12.18□□□□□ -0.46
UBA52P62987 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 KRT8P14-201ENST00000414254 1442 ntBASIC12.18□□□□□ -0.46
UBA52P62987 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
UBA52P62987 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
UBA52P62987 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UBA52P62987 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBA52P62987 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
UBA52P62987 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.17□□□□□ -0.46
UBA52P62987 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
UBA52P62987 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 AL157996.1-201ENST00000624684 2299 ntBASIC12.17□□□□□ -0.46
UBA52P62987 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 TRIM80P-201ENST00000455685 2848 ntBASIC12.17□□□□□ -0.46
UBA52P62987 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.17□□□□□ -0.46
UBA52P62987 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms