Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 RPL13AP3-202ENST00000494676 1473 ntBASIC11.71□□□□□ -0.53
RIPPLY3P57055 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 SHMT1P1-201ENST00000419974 1312 ntBASIC11.71□□□□□ -0.53
RIPPLY3P57055 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 AIG1-203ENST00000367596 559 ntTSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 AC073869.2-201ENST00000417338 1026 ntBASIC11.71□□□□□ -0.53
RIPPLY3P57055 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RIPPLY3P57055 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 RBM14-205ENST00000443702 732 ntTSL 3 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 RN7SL128P-201ENST00000467883 305 ntBASIC11.71□□□□□ -0.53
RIPPLY3P57055 RN7SL340P-201ENST00000470792 296 ntBASIC11.71□□□□□ -0.53
RIPPLY3P57055 RPSAP70-201ENST00000504462 864 ntBASIC11.71□□□□□ -0.53
RIPPLY3P57055 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 CDC37P2-201ENST00000562287 1029 ntBASIC11.71□□□□□ -0.53
RIPPLY3P57055 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 CES1P2-201ENST00000566467 1242 ntBASIC11.71□□□□□ -0.53
RIPPLY3P57055 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 RN7SL665P-201ENST00000578793 300 ntBASIC11.71□□□□□ -0.53
RIPPLY3P57055 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.71□□□□□ -0.53
RIPPLY3P57055 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RIPPLY3P57055 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RIPPLY3P57055 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RIPPLY3P57055 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RIPPLY3P57055 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RIPPLY3P57055 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
RIPPLY3P57055 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.71□□□□□ -0.54
RIPPLY3P57055 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RIPPLY3P57055 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
RIPPLY3P57055 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.71□□□□□ -0.54
RIPPLY3P57055 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
RIPPLY3P57055 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 AL121753.2-201ENST00000624581 1461 ntBASIC11.7□□□□□ -0.54
RIPPLY3P57055 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RIPPLY3P57055 PARVG-208ENST00000466375 820 ntTSL 2 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC11.7□□□□□ -0.54
RIPPLY3P57055 AL136298.3-201ENST00000556746 445 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms