Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC17.12■□□□□ 0.33
AFDNP55196 YY1P2-201ENST00000438766 948 ntBASIC17.12■□□□□ 0.33
AFDNP55196 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC17.12■□□□□ 0.33
AFDNP55196 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 AC010202.1-201ENST00000551181 405 ntBASIC17.12■□□□□ 0.33
AFDNP55196 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
AFDNP55196 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.12■□□□□ 0.33
AFDNP55196 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 STK25-235ENST00000543554 2556 ntTSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
AFDNP55196 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
AFDNP55196 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 AC000077.1-201ENST00000420012 953 ntBASIC17.12■□□□□ 0.33
AFDNP55196 FAM197Y6-201ENST00000420524 766 ntBASIC17.12■□□□□ 0.33
AFDNP55196 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFDNP55196 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC17.12■□□□□ 0.33
AFDNP55196 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC17.12■□□□□ 0.33
AFDNP55196 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC17.12■□□□□ 0.33
AFDNP55196 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC17.12■□□□□ 0.33
AFDNP55196 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC17.12■□□□□ 0.33
AFDNP55196 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
AFDNP55196 RPS5-205ENST00000598495 800 ntTSL 3 BASIC17.12■□□□□ 0.33
AFDNP55196 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
AFDNP55196 AC139100.2-201ENST00000616901 662 ntBASIC17.12■□□□□ 0.33
AFDNP55196 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC17.12■□□□□ 0.33
AFDNP55196 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC17.12■□□□□ 0.33
AFDNP55196 AC011477.7-201ENST00000617163 1440 ntBASIC17.12■□□□□ 0.33
AFDNP55196 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
AFDNP55196 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.11■□□□□ 0.33
AFDNP55196 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
AFDNP55196 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.11■□□□□ 0.33
AFDNP55196 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AFDNP55196 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
AFDNP55196 CXXC1P1-202ENST00000489409 1212 ntBASIC17.11■□□□□ 0.33
AFDNP55196 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC17.11■□□□□ 0.33
AFDNP55196 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC17.11■□□□□ 0.33
AFDNP55196 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
AFDNP55196 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC17.11■□□□□ 0.33
AFDNP55196 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
AFDNP55196 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC17.11■□□□□ 0.33
AFDNP55196 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AFDNP55196 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.11■□□□□ 0.33
AFDNP55196 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
AFDNP55196 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AFDNP55196 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AFDNP55196 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AFDNP55196 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AFDNP55196 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AFDNP55196 RBP4-203ENST00000371469 814 ntTSL 5 BASIC17.1■□□□□ 0.33
AFDNP55196 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AFDNP55196 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC17.1■□□□□ 0.33
AFDNP55196 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC17.1■□□□□ 0.33
AFDNP55196 AC015818.1-201ENST00000451011 244 ntBASIC17.1■□□□□ 0.33
AFDNP55196 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC17.1■□□□□ 0.33
AFDNP55196 AP000533.1-201ENST00000456143 1177 ntBASIC17.1■□□□□ 0.33
AFDNP55196 RNA5SP288-201ENST00000516075 93 ntBASIC17.1■□□□□ 0.33
AFDNP55196 AC005840.4-201ENST00000541242 2494 ntBASIC17.1■□□□□ 0.33
AFDNP55196 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AFDNP55196 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.1■□□□□ 0.33
AFDNP55196 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC17.1■□□□□ 0.33
AFDNP55196 MIR6893-201ENST00000613458 69 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms