Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPT1AP50416 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.28■□□□□ 0.04
CPT1AP50416 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 LILRP2-202ENST00000413572 1383 ntBASIC15.28■□□□□ 0.04
CPT1AP50416 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.28■□□□□ 0.04
CPT1AP50416 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.28■□□□□ 0.04
CPT1AP50416 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.28■□□□□ 0.04
CPT1AP50416 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.28■□□□□ 0.04
CPT1AP50416 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC15.28■□□□□ 0.04
CPT1AP50416 AL136084.1-201ENST00000449172 318 ntBASIC15.28■□□□□ 0.04
CPT1AP50416 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC15.28■□□□□ 0.04
CPT1AP50416 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.28■□□□□ 0.04
CPT1AP50416 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC15.28■□□□□ 0.04
CPT1AP50416 MIR2278-201ENST00000516344 96 ntBASIC15.28■□□□□ 0.04
CPT1AP50416 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.28■□□□□ 0.04
CPT1AP50416 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC15.28■□□□□ 0.04
CPT1AP50416 KF455155.1-201ENST00000604493 303 ntBASIC15.28■□□□□ 0.04
CPT1AP50416 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CPT1AP50416 AC148477.9-201ENST00000623974 539 ntBASIC15.28■□□□□ 0.04
CPT1AP50416 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC15.28■□□□□ 0.04
CPT1AP50416 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.28■□□□□ 0.04
CPT1AP50416 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CPT1AP50416 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CPT1AP50416 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CPT1AP50416 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.27■□□□□ 0.04
CPT1AP50416 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 BX640514.1-201ENST00000583223 1918 ntBASIC15.27■□□□□ 0.04
CPT1AP50416 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CPT1AP50416 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.27■□□□□ 0.04
CPT1AP50416 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CPT1AP50416 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.27■□□□□ 0.04
CPT1AP50416 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CPT1AP50416 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPT1AP50416 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15.27■□□□□ 0.04
CPT1AP50416 AC005077.3-201ENST00000449614 213 ntBASIC15.27■□□□□ 0.04
CPT1AP50416 RPL29P2-201ENST00000488409 460 ntBASIC15.27■□□□□ 0.04
CPT1AP50416 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.27■□□□□ 0.04
CPT1AP50416 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.27■□□□□ 0.04
CPT1AP50416 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15.27■□□□□ 0.04
CPT1AP50416 KRT8P34-201ENST00000577607 1044 ntBASIC15.27■□□□□ 0.04
CPT1AP50416 RN7SL134P-201ENST00000579756 303 ntBASIC15.27■□□□□ 0.04
CPT1AP50416 MIR4746-201ENST00000579802 71 ntBASIC15.27■□□□□ 0.04
CPT1AP50416 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.27■□□□□ 0.04
CPT1AP50416 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC15.27■□□□□ 0.04
CPT1AP50416 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC15.27■□□□□ 0.04
CPT1AP50416 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.27■□□□□ 0.04
CPT1AP50416 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC15.27■□□□□ 0.04
CPT1AP50416 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.27■□□□□ 0.04
CPT1AP50416 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CPT1AP50416 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 CICP16-201ENST00000502609 2813 ntBASIC15.27■□□□□ 0.03
CPT1AP50416 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CPT1AP50416 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CPT1AP50416 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.27■□□□□ 0.03
CPT1AP50416 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.27■□□□□ 0.03
CPT1AP50416 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 AC245140.2-201ENST00000624054 1939 ntBASIC15.27■□□□□ 0.03
CPT1AP50416 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CPT1AP50416 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.27■□□□□ 0.03
CPT1AP50416 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 RCC2P5-201ENST00000492126 1487 ntBASIC15.27■□□□□ 0.03
CPT1AP50416 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPT1AP50416 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
CPT1AP50416 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CPT1AP50416 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.27■□□□□ 0.03
CPT1AP50416 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms