Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
GRIA4P48058 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GRIA4P48058 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
GRIA4P48058 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GRIA4P48058 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GRIA4P48058 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
GRIA4P48058 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.35□□□□□ -0.11
GRIA4P48058 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.35□□□□□ -0.11
GRIA4P48058 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 DUX4L50-201ENST00000455245 715 ntBASIC14.35□□□□□ -0.11
GRIA4P48058 FTH1P22-201ENST00000456305 520 ntBASIC14.35□□□□□ -0.11
GRIA4P48058 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.35□□□□□ -0.11
GRIA4P48058 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.35□□□□□ -0.11
GRIA4P48058 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 RPL17P45-201ENST00000586289 509 ntBASIC14.35□□□□□ -0.11
GRIA4P48058 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.35□□□□□ -0.11
GRIA4P48058 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 LINC00115-201ENST00000473798 1317 ntBASIC14.35□□□□□ -0.11
GRIA4P48058 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.35□□□□□ -0.11
GRIA4P48058 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
GRIA4P48058 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
GRIA4P48058 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
GRIA4P48058 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GRIA4P48058 COL6A4P2-202ENST00000504443 2753 ntBASIC14.34□□□□□ -0.11
GRIA4P48058 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.34□□□□□ -0.11
GRIA4P48058 RPL18AP3-201ENST00000462885 528 ntBASIC14.34□□□□□ -0.11
GRIA4P48058 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 CTBP2P4-201ENST00000513884 920 ntBASIC14.34□□□□□ -0.11
GRIA4P48058 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 MARK2P16-201ENST00000605714 1723 ntBASIC14.34□□□□□ -0.11
GRIA4P48058 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GRIA4P48058 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GRIA4P48058 AC020658.7-201ENST00000624274 2442 ntBASIC14.34□□□□□ -0.11
GRIA4P48058 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.34□□□□□ -0.11
GRIA4P48058 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.34□□□□□ -0.11
GRIA4P48058 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms