Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RXRBP28702 OR10AA1P-201ENST00000417823 937 ntBASIC17.64■□□□□ 0.41
RXRBP28702 RN7SL833P-201ENST00000498758 284 ntBASIC17.64■□□□□ 0.41
RXRBP28702 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RXRBP28702 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RXRBP28702 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC17.64■□□□□ 0.41
RXRBP28702 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC17.64■□□□□ 0.41
RXRBP28702 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC17.64■□□□□ 0.41
RXRBP28702 AD000091.1-201ENST00000592379 287 ntBASIC17.64■□□□□ 0.41
RXRBP28702 CTBP2P7-201ENST00000593270 1244 ntBASIC17.64■□□□□ 0.41
RXRBP28702 AC007032.1-201ENST00000609281 847 ntBASIC17.64■□□□□ 0.41
RXRBP28702 AC130469.2-201ENST00000625112 1092 ntBASIC17.64■□□□□ 0.41
RXRBP28702 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RXRBP28702 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RXRBP28702 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RXRBP28702 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RXRBP28702 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
RXRBP28702 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
RXRBP28702 AC011498.7-201ENST00000624986 2027 ntBASIC17.64■□□□□ 0.41
RXRBP28702 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RXRBP28702 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RXRBP28702 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RXRBP28702 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.63■□□□□ 0.41
RXRBP28702 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RXRBP28702 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RXRBP28702 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC17.63■□□□□ 0.41
RXRBP28702 HLA-DRB6-202ENST00000437183 1090 ntBASIC17.63■□□□□ 0.41
RXRBP28702 AL132656.1-201ENST00000452173 490 ntBASIC17.63■□□□□ 0.41
RXRBP28702 AC233724.7-201ENST00000511476 253 ntBASIC17.63■□□□□ 0.41
RXRBP28702 SAA2-206ENST00000530400 323 ntTSL 3 BASIC17.63■□□□□ 0.41
RXRBP28702 ADIPOR1P2-201ENST00000554199 820 ntBASIC17.63■□□□□ 0.41
RXRBP28702 RHOJ-202ENST00000555125 548 ntTSL 2 BASIC17.63■□□□□ 0.41
RXRBP28702 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC17.63■□□□□ 0.41
RXRBP28702 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC17.63■□□□□ 0.41
RXRBP28702 WSB1-213ENST00000583193 552 ntTSL 4 BASIC17.63■□□□□ 0.41
RXRBP28702 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC17.63■□□□□ 0.41
RXRBP28702 AL136084.3-201ENST00000605631 439 ntBASIC17.63■□□□□ 0.41
RXRBP28702 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.63■□□□□ 0.41
RXRBP28702 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RXRBP28702 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.63■□□□□ 0.41
RXRBP28702 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.63■□□□□ 0.41
RXRBP28702 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.63■□□□□ 0.41
RXRBP28702 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RXRBP28702 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.63■□□□□ 0.41
RXRBP28702 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.63■□□□□ 0.41
RXRBP28702 SPATA22-203ENST00000397168 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RXRBP28702 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC17.63■□□□□ 0.41
RXRBP28702 RCC2P5-201ENST00000492126 1487 ntBASIC17.63■□□□□ 0.41
RXRBP28702 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RXRBP28702 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RXRBP28702 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.62■□□□□ 0.41
RXRBP28702 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RXRBP28702 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RXRBP28702 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 AC245297.1-201ENST00000313342 933 ntBASIC17.62■□□□□ 0.41
RXRBP28702 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC17.62■□□□□ 0.41
RXRBP28702 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
RXRBP28702 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC17.62■□□□□ 0.41
RXRBP28702 HNRNPA1P55-201ENST00000505935 955 ntBASIC17.62■□□□□ 0.41
RXRBP28702 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RXRBP28702 PIGCP1-201ENST00000527583 895 ntBASIC17.62■□□□□ 0.41
RXRBP28702 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RXRBP28702 TLE2-205ENST00000586422 389 ntTSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC17.62■□□□□ 0.41
RXRBP28702 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC17.62■□□□□ 0.41
RXRBP28702 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 AL356423.1-201ENST00000604953 538 ntBASIC17.62■□□□□ 0.41
RXRBP28702 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 CLUHP3-207ENST00000563678 1303 ntBASIC17.62■□□□□ 0.41
RXRBP28702 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RXRBP28702 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC17.62■□□□□ 0.41
RXRBP28702 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RXRBP28702 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.62■□□□□ 0.41
RXRBP28702 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RXRBP28702 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RXRBP28702 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.62■□□□□ 0.41
RXRBP28702 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
RXRBP28702 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RXRBP28702 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RXRBP28702 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RXRBP28702 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms