Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 AC024075.2-201ENST00000598112 1473 ntBASIC13.15□□□□□ -0.3
CHMP24386 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CHMP24386 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CHMP24386 CYP4F23P-201ENST00000593402 1579 ntBASIC13.15□□□□□ -0.3
CHMP24386 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
CHMP24386 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
CHMP24386 AL355102.3-201ENST00000554299 1678 ntBASIC13.15□□□□□ -0.31
CHMP24386 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CHMP24386 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
CHMP24386 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
CHMP24386 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.14□□□□□ -0.31
CHMP24386 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.14□□□□□ -0.31
CHMP24386 PCDHA6-201ENST00000378126 3267 ntBASIC13.14□□□□□ -0.31
CHMP24386 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.14□□□□□ -0.31
CHMP24386 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CHMP24386 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CHMP24386 AL662890.1-201ENST00000396818 632 ntBASIC13.14□□□□□ -0.31
CHMP24386 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 XBP1P1-201ENST00000436573 652 ntBASIC13.14□□□□□ -0.31
CHMP24386 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 AC005077.2-201ENST00000449786 690 ntBASIC13.14□□□□□ -0.31
CHMP24386 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.14□□□□□ -0.31
CHMP24386 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 HIST2H2BC-201ENST00000498492 580 ntBASIC13.14□□□□□ -0.31
CHMP24386 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.14□□□□□ -0.31
CHMP24386 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.14□□□□□ -0.31
CHMP24386 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.14□□□□□ -0.31
CHMP24386 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.14□□□□□ -0.31
CHMP24386 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 AC091544.8-201ENST00000619490 361 ntBASIC13.14□□□□□ -0.31
CHMP24386 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CHMP24386 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.14□□□□□ -0.31
CHMP24386 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 AL445250.1-201ENST00000641671 2259 ntBASIC13.14□□□□□ -0.31
CHMP24386 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CHMP24386 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CHMP24386 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP24386 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 ABCD1P2-201ENST00000429313 1601 ntBASIC13.13□□□□□ -0.31
CHMP24386 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CHMP24386 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
CHMP24386 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 AP000437.1-201ENST00000624057 2085 ntBASIC13.13□□□□□ -0.31
CHMP24386 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.13□□□□□ -0.31
CHMP24386 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.13□□□□□ -0.31
CHMP24386 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CHMP24386 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
CHMP24386 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.13□□□□□ -0.31
CHMP24386 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms