Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 AL022313.4-201ENST00000562756 2046 ntBASIC10.96□□□□□ -0.65
CD28P10747 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 CSPG4P11-201ENST00000560634 4910 ntBASIC10.96□□□□□ -0.65
CD28P10747 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC10.96□□□□□ -0.65
CD28P10747 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 CTBP2P8-201ENST00000422584 1330 ntBASIC10.96□□□□□ -0.65
CD28P10747 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC10.96□□□□□ -0.65
CD28P10747 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 RPL35P9-201ENST00000446059 350 ntBASIC10.96□□□□□ -0.65
CD28P10747 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC10.96□□□□□ -0.65
CD28P10747 AREG-202ENST00000502307 956 ntTSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 REEP5-205ENST00000504247 480 ntTSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC10.96□□□□□ -0.65
CD28P10747 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC10.96□□□□□ -0.65
CD28P10747 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC10.96□□□□□ -0.65
CD28P10747 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC10.96□□□□□ -0.65
CD28P10747 AL359091.4-201ENST00000610052 409 ntBASIC10.96□□□□□ -0.65
CD28P10747 AC006158.1-201ENST00000610661 249 ntBASIC10.96□□□□□ -0.65
CD28P10747 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CD28P10747 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.66
CD28P10747 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CD28P10747 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CD28P10747 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CD28P10747 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CD28P10747 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CD28P10747 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
CD28P10747 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CD28P10747 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
CD28P10747 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CD28P10747 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.96□□□□□ -0.66
CD28P10747 AC090505.1-201ENST00000430515 1834 ntBASIC10.95□□□□□ -0.66
CD28P10747 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC10.95□□□□□ -0.66
CD28P10747 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 RPL13AP3-202ENST00000494676 1473 ntBASIC10.95□□□□□ -0.66
CD28P10747 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CD28P10747 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 MSANTD2P1-201ENST00000445341 1368 ntBASIC10.95□□□□□ -0.66
CD28P10747 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 RNVU1-8-201ENST00000364272 125 ntBASIC10.95□□□□□ -0.66
CD28P10747 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CD28P10747 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 AC103592.1-201ENST00000394513 664 ntBASIC10.95□□□□□ -0.66
CD28P10747 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 LINC00265-2P-201ENST00000413372 782 ntBASIC10.95□□□□□ -0.66
CD28P10747 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms