Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.47□□□□□ -0.09
CD48P09326 AC244452.3-201ENST00000636814 210 ntBASIC14.47□□□□□ -0.09
CD48P09326 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.47□□□□□ -0.09
CD48P09326 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.47□□□□□ -0.09
CD48P09326 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.47□□□□□ -0.09
CD48P09326 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CD48P09326 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
CD48P09326 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD48P09326 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CD48P09326 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD48P09326 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD48P09326 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CD48P09326 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 Z82170.1-201ENST00000625081 3192 ntBASIC14.46□□□□□ -0.09
CD48P09326 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.46□□□□□ -0.09
CD48P09326 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.46□□□□□ -0.09
CD48P09326 ELK2AP-201ENST00000392510 1007 ntBASIC14.46□□□□□ -0.09
CD48P09326 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD48P09326 AC136604.1-202ENST00000425471 771 ntBASIC14.46□□□□□ -0.09
CD48P09326 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 RPSAP15-201ENST00000448168 861 ntBASIC14.46□□□□□ -0.09
CD48P09326 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 RN7SL11P-201ENST00000471305 293 ntBASIC14.46□□□□□ -0.09
CD48P09326 AC095040.1-201ENST00000513286 675 ntBASIC14.46□□□□□ -0.09
CD48P09326 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.46□□□□□ -0.09
CD48P09326 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.46□□□□□ -0.09
CD48P09326 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.46□□□□□ -0.09
CD48P09326 TBC1D27-202ENST00000424239 1573 ntBASIC14.46□□□□□ -0.09
CD48P09326 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD48P09326 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.46□□□□□ -0.09
CD48P09326 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
CD48P09326 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.46□□□□□ -0.1
CD48P09326 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.46□□□□□ -0.1
CD48P09326 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD48P09326 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD48P09326 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD48P09326 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD48P09326 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD48P09326 AL133338.1-201ENST00000565695 1517 ntBASIC14.46□□□□□ -0.1
CD48P09326 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD48P09326 AC131212.3-201ENST00000624087 4219 ntBASIC14.46□□□□□ -0.1
CD48P09326 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD48P09326 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD48P09326 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.45□□□□□ -0.1
CD48P09326 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 EGLN3-205ENST00000547327 2849 ntBASIC14.45□□□□□ -0.1
CD48P09326 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CD48P09326 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.45□□□□□ -0.1
CD48P09326 PDIA3P2-201ENST00000428073 158 ntBASIC14.45□□□□□ -0.1
CD48P09326 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.45□□□□□ -0.1
CD48P09326 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.45□□□□□ -0.1
CD48P09326 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.45□□□□□ -0.1
CD48P09326 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.45□□□□□ -0.1
CD48P09326 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD48P09326 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.45□□□□□ -0.1
CD48P09326 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.45□□□□□ -0.1
CD48P09326 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms