Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.06□□□□□ -0.16
APOA4P06727 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.06□□□□□ -0.16
APOA4P06727 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
APOA4P06727 SNORA50C-201ENST00000408535 133 ntBASIC14.06□□□□□ -0.16
APOA4P06727 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.06□□□□□ -0.16
APOA4P06727 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.06□□□□□ -0.16
APOA4P06727 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.06□□□□□ -0.16
APOA4P06727 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 KRT8P13-201ENST00000463294 1010 ntBASIC14.06□□□□□ -0.16
APOA4P06727 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.06□□□□□ -0.16
APOA4P06727 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.06□□□□□ -0.16
APOA4P06727 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 AC100757.4-201ENST00000626934 759 ntBASIC14.06□□□□□ -0.16
APOA4P06727 SNORA50.1-201ENST00000628590 135 ntBASIC14.06□□□□□ -0.16
APOA4P06727 AC083964.2-201ENST00000623988 2396 ntBASIC14.06□□□□□ -0.16
APOA4P06727 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
APOA4P06727 AC019294.4-201ENST00000561777 2905 ntBASIC14.06□□□□□ -0.16
APOA4P06727 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
APOA4P06727 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APOA4P06727 FP325330.2-201ENST00000624219 5630 ntBASIC14.05□□□□□ -0.16
APOA4P06727 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.05□□□□□ -0.16
APOA4P06727 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 AC108024.1-201ENST00000626286 1721 ntBASIC14.05□□□□□ -0.16
APOA4P06727 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APOA4P06727 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.05□□□□□ -0.16
APOA4P06727 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
APOA4P06727 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.05□□□□□ -0.16
APOA4P06727 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.05□□□□□ -0.16
APOA4P06727 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.05□□□□□ -0.16
APOA4P06727 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
APOA4P06727 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APOA4P06727 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.05□□□□□ -0.16
APOA4P06727 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.05□□□□□ -0.16
APOA4P06727 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.05□□□□□ -0.16
APOA4P06727 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
APOA4P06727 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.05□□□□□ -0.16
APOA4P06727 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.05□□□□□ -0.16
APOA4P06727 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.05□□□□□ -0.16
APOA4P06727 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
APOA4P06727 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
APOA4P06727 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOA4P06727 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.04□□□□□ -0.16
APOA4P06727 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms