Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 LINC00638-201ENST00000555578 2518 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC006372.4-201ENST00000624122 1543 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC091046.1-201ENST00000331871 207 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SAT1-201ENST00000379251 801 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SAT1-202ENST00000379253 909 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SAT1-203ENST00000379254 868 ntTSL 3 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC098934.1-203ENST00000442868 1262 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC084346.2-201ENST00000607097 949 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC009560.1-201ENST00000620208 434 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SALL4P6-201ENST00000429385 1691 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 TEKT4P2-202ENST00000559466 1312 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 MIR497HG-202ENST00000572453 3838 ntBASIC10.8□□□□□ -0.68
TRBV12-3P01733 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TRBV12-3P01733 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.8□□□□□ -0.68
TRBV12-3P01733 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms