Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.31□□□□□ -0.44
NPIPB4C9JG80 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 DKKL1P1-201ENST00000400550 698 ntBASIC12.31□□□□□ -0.44
NPIPB4C9JG80 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 AC018638.5-201ENST00000450885 754 ntBASIC12.31□□□□□ -0.44
NPIPB4C9JG80 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 AP000358.1-201ENST00000456260 156 ntBASIC12.31□□□□□ -0.44
NPIPB4C9JG80 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 AL031673.1-201ENST00000611460 466 ntBASIC12.31□□□□□ -0.44
NPIPB4C9JG80 AL353770.1-201ENST00000614915 403 ntBASIC12.31□□□□□ -0.44
NPIPB4C9JG80 AC009145.4-201ENST00000625119 1294 ntBASIC12.31□□□□□ -0.44
NPIPB4C9JG80 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 PDXDC2P-206ENST00000534700 1315 ntBASIC12.31□□□□□ -0.44
NPIPB4C9JG80 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPB4C9JG80 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 AC087386.2-201ENST00000623212 4637 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 AP002761.4-201ENST00000565433 3361 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 Z97180.1-201ENST00000445173 988 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 FTH1P22-201ENST00000456305 520 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 RN7SL767P-201ENST00000493013 295 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 MIR3619-201ENST00000579667 83 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 AC020922.3-201ENST00000595064 547 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms