Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 RNLS-203ENST00000437752 525 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 AC023906.1-201ENST00000486386 453 ntBASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 AC004801.1-201ENST00000549557 360 ntBASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 AL359219.1-201ENST00000556311 934 ntBASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 AC005089.1-201ENST00000619486 2241 ntBASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 SALL4P6-201ENST00000429385 1691 ntBASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 TUBB8P4-201ENST00000511806 1324 ntBASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 GRK6P1-201ENST00000400595 1711 ntBASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC005722.1-201ENST00000431878 964 ntBASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC018846.1-201ENST00000568231 183 ntBASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 RN7SL121P-201ENST00000584223 273 ntBASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 GGNBP1-204ENST00000613113 887 ntBASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC026336.4-201ENST00000624565 1050 ntBASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC140479.7-201ENST00000636301 2332 ntBASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 AC007191.1-201ENST00000623179 2995 ntBASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC187A0A096LP49 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms