Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 LINC00638-201ENST00000555578 2518 ntBASIC11.4□□□□□ -0.58
RAB40CQ96S21 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 AC102953.2-201ENST00000609755 3026 ntBASIC11.4□□□□□ -0.58
RAB40CQ96S21 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 AC190387.1-201ENST00000551683 408 ntBASIC11.4□□□□□ -0.58
RAB40CQ96S21 AC140658.4-201ENST00000561990 352 ntBASIC11.4□□□□□ -0.58
RAB40CQ96S21 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 AC140912.1-201ENST00000577171 1054 ntBASIC11.4□□□□□ -0.58
RAB40CQ96S21 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 AC008494.3-201ENST00000606615 944 ntBASIC11.4□□□□□ -0.58
RAB40CQ96S21 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 AC132938.4-201ENST00000623835 848 ntBASIC11.4□□□□□ -0.58
RAB40CQ96S21 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
RAB40CQ96S21 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.4□□□□□ -0.59
RAB40CQ96S21 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
RAB40CQ96S21 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.4□□□□□ -0.59
RAB40CQ96S21 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
RAB40CQ96S21 TMBIM7P-202ENST00000641474 1516 ntBASIC11.4□□□□□ -0.59
RAB40CQ96S21 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
RAB40CQ96S21 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.59
RAB40CQ96S21 AL021155.1-201ENST00000438808 2637 ntBASIC11.39□□□□□ -0.59
RAB40CQ96S21 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 BAATP1-201ENST00000412284 1225 ntBASIC11.39□□□□□ -0.59
RAB40CQ96S21 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms