Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 AC019294.4-201ENST00000561777 2905 ntBASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 ALG1L13P-202ENST00000519320 584 ntBASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 MIR3677-201ENST00000578964 60 ntBASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMARCC2Q8TAQ2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 BX679664.3-201ENST00000414070 555 ntBASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 AC113935.1-201ENST00000471722 555 ntBASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 AC114947.1-202ENST00000514136 344 ntBASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 KRT8P31-201ENST00000504812 1408 ntBASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMARCC2Q8TAQ2 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 ZNF493-208ENST00000599461 1769 ntBASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms