Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 RN7SL692P-201ENST00000464677 288 ntBASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 AL358781.1-202ENST00000321081 1360 ntBASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AC018629.1-201ENST00000623381 1736 ntBASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AGGF1P10-201ENST00000635005 2191 ntBASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 Z98885.3-201ENST00000624882 1757 ntBASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AC093462.1-201ENST00000621167 1683 ntBASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AC026954.1-201ENST00000429771 1293 ntBASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AC012441.2-201ENST00000444843 739 ntBASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 CROCCP4-201ENST00000457096 498 ntBASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AL021155.1-201ENST00000438808 2637 ntBASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BBS1Q8NFJ9 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms