Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ALMS1P1-201ENST00000428767 921 ntBASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC005586.2-201ENST00000563946 837 ntBASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AL121992.3-201ENST00000606186 346 ntBASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AP001331.1-201ENST00000413008 1015 ntBASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 RBMX2P5-201ENST00000424312 969 ntBASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 TUBB2BP1-201ENST00000404155 871 ntBASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AL513477.1-201ENST00000602865 2407 ntBASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CCDC168Q8NDH2 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms