Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 AL928654.5-201ENST00000624831 2501 ntBASIC15.55■□□□□ 0.08
TRIM50Q86XT4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 PES1P2-201ENST00000449745 1735 ntBASIC15.55■□□□□ 0.08
TRIM50Q86XT4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 GCSHP3-201ENST00000431120 391 ntBASIC15.55■□□□□ 0.08
TRIM50Q86XT4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 RN7SL556P-201ENST00000582856 298 ntBASIC15.55■□□□□ 0.08
TRIM50Q86XT4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM50Q86XT4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 RCC2P1-201ENST00000452257 1476 ntBASIC15.54■□□□□ 0.08
TRIM50Q86XT4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 OR2W2P-201ENST00000406313 909 ntBASIC15.54■□□□□ 0.08
TRIM50Q86XT4 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 KRT18P37-201ENST00000520711 1282 ntBASIC15.54■□□□□ 0.08
TRIM50Q86XT4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 AC141586.1-203ENST00000567242 366 ntBASIC15.54■□□□□ 0.08
TRIM50Q86XT4 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 AC073592.2-201ENST00000623062 780 ntBASIC15.54■□□□□ 0.08
TRIM50Q86XT4 AC138466.4-201ENST00000623965 852 ntBASIC15.54■□□□□ 0.08
TRIM50Q86XT4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 AC090643.2-201ENST00000623442 2029 ntBASIC15.54■□□□□ 0.08
TRIM50Q86XT4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM50Q86XT4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms