Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 GUCY2EP-203ENST00000531117 1918 ntBASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 CCL19-202ENST00000378800 414 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 PHBP10-201ENST00000416467 784 ntBASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AC007279.1-201ENST00000448547 837 ntBASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 RNU1-80P-201ENST00000459500 161 ntBASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AC147876.1-201ENST00000504408 322 ntBASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 RN7SL602P-201ENST00000578326 324 ntBASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 RN7SL718P-201ENST00000581254 303 ntBASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 NEK4P3-201ENST00000604859 544 ntBASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 MYO15B-237ENST00000642007 4893 ntBASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDCP2Q5VXM1 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 AC008620.2-201ENST00000510294 1569 ntBASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 NRADDP-202ENST00000641269 1585 ntBASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 RCC2P1-201ENST00000452257 1476 ntBASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 AC064850.1-201ENST00000413279 1398 ntBASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 CCND3P1-201ENST00000438347 580 ntBASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 RN7SL524P-201ENST00000581152 300 ntBASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 KF455155.1-201ENST00000604493 303 ntBASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms