Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 OR7E155P-201ENST00000412208 1014 ntBASIC16.27■□□□□ 0.2
CNTNAP1P78357 RFNG-202ENST00000429557 994 ntTSL 5 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 AC139143.1-201ENST00000441772 1207 ntBASIC16.27■□□□□ 0.2
CNTNAP1P78357 SRP9P1-201ENST00000445874 261 ntBASIC16.27■□□□□ 0.2
CNTNAP1P78357 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 MIR3940-201ENST00000579148 102 ntBASIC16.27■□□□□ 0.2
CNTNAP1P78357 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 AC040160.2-201ENST00000623816 1675 ntBASIC16.27■□□□□ 0.2
CNTNAP1P78357 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNTNAP1P78357 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.27■□□□□ 0.19
CNTNAP1P78357 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNTNAP1P78357 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNTNAP1P78357 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNTNAP1P78357 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNTNAP1P78357 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.27■□□□□ 0.19
CNTNAP1P78357 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CNTNAP1P78357 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNTNAP1P78357 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNTNAP1P78357 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNTNAP1P78357 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 SPTLC1P3-201ENST00000403408 259 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 MPV17-209ENST00000405983 859 ntTSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 IQCF4-203ENST00000428561 420 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 AC074019.1-201ENST00000428788 1096 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 RNA5SP420-201ENST00000516997 137 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 IGHVII-74-1-201ENST00000517572 241 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 AL031590.1-202ENST00000641466 1737 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 AC103702.1-201ENST00000548801 2630 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 BX640514.1-201ENST00000583223 1918 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 LINC00552-201ENST00000625151 2579 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 KRT8P42-201ENST00000405771 1399 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 AC069061.4-201ENST00000581294 1347 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.26■□□□□ 0.19
CNTNAP1P78357 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNTNAP1P78357 RCC2P5-201ENST00000492126 1487 ntBASIC16.26■□□□□ 0.19
CNTNAP1P78357 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms