Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SNRPFP62306 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SNRPFP62306 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.11■□□□□ 0.01
SNRPFP62306 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SNRPFP62306 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.11■□□□□ 0.01
SNRPFP62306 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.11■□□□□ 0.01
SNRPFP62306 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.11■□□□□ 0.01
SNRPFP62306 MRPL22P1-201ENST00000505398 616 ntBASIC15.11■□□□□ 0.01
SNRPFP62306 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.11■□□□□ 0.01
SNRPFP62306 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.11■□□□□ 0.01
SNRPFP62306 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SNRPFP62306 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.11■□□□□ 0.01
SNRPFP62306 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.11■□□□□ 0.01
SNRPFP62306 AL133499.1-201ENST00000596207 608 ntBASIC15.11■□□□□ 0.01
SNRPFP62306 AC106872.11-201ENST00000605838 421 ntBASIC15.11■□□□□ 0.01
SNRPFP62306 AL009176.1-201ENST00000607876 650 ntBASIC15.11■□□□□ 0.01
SNRPFP62306 AL021578.1-201ENST00000613646 709 ntBASIC15.11■□□□□ 0.01
SNRPFP62306 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.11■□□□□ 0.01
SNRPFP62306 MKRN5P-201ENST00000445263 1467 ntBASIC15.11■□□□□ 0.01
SNRPFP62306 KRT8P19-201ENST00000551916 1455 ntBASIC15.11■□□□□ 0.01
SNRPFP62306 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SNRPFP62306 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SNRPFP62306 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SNRPFP62306 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 ST20-AS1-201ENST00000560255 4223 ntBASIC15.11■□□□□ 0.01
SNRPFP62306 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.11■□□□□ 0.01
SNRPFP62306 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.11■□□□□ 0.01
SNRPFP62306 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNRPFP62306 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SNRPFP62306 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
SNRPFP62306 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SNRPFP62306 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SNRPFP62306 LINC00638-201ENST00000555578 2518 ntBASIC15.1■□□□□ 0.01
SNRPFP62306 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.1■□□□□ 0.01
SNRPFP62306 AC073869.1-201ENST00000415574 2762 ntBASIC15.1■□□□□ 0.01
SNRPFP62306 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.1■□□□□ 0.01
SNRPFP62306 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SNRPFP62306 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SNRPFP62306 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SNRPFP62306 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.1■□□□□ 0.01
SNRPFP62306 AC022494.1-201ENST00000466044 728 ntBASIC15.1■□□□□ 0.01
SNRPFP62306 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.1■□□□□ 0.01
SNRPFP62306 RN7SL564P-201ENST00000496309 250 ntBASIC15.1■□□□□ 0.01
SNRPFP62306 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.1■□□□□ 0.01
SNRPFP62306 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SNRPFP62306 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.1■□□□□ 0.01
SNRPFP62306 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
SNRPFP62306 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.1■□□□□ 0.01
SNRPFP62306 AC007250.1-201ENST00000608934 338 ntBASIC15.1■□□□□ 0.01
SNRPFP62306 AC103691.2-201ENST00000618824 433 ntBASIC15.1■□□□□ 0.01
SNRPFP62306 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 AC008040.5-201ENST00000599781 1781 ntBASIC15.1■□□□□ 0.01
SNRPFP62306 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.1■□□□□ 0.01
SNRPFP62306 ERG-211ENST00000453032 1595 ntTSL 2 BASIC15.1■□□□□ 0.01
SNRPFP62306 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SNRPFP62306 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.1■□□□□ 0.01
SNRPFP62306 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.1■□□□□ 0.01
SNRPFP62306 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.1■□□□□ 0.01
SNRPFP62306 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.1■□□□□ 0.01
SNRPFP62306 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SNRPFP62306 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRPFP62306 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRPFP62306 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.09■□□□□ 0.01
SNRPFP62306 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.09■□□□□ 0.01
SNRPFP62306 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNRPFP62306 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
SNRPFP62306 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.09■□□□□ 0.01
SNRPFP62306 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRPFP62306 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNRPFP62306 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRPFP62306 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRPFP62306 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SNRPFP62306 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNRPFP62306 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRPFP62306 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms