Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12.77□□□□□ -0.37
CXCR4P61073 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.77□□□□□ -0.37
CXCR4P61073 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.77□□□□□ -0.37
CXCR4P61073 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CXCR4P61073 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 CICP9-201ENST00000444451 1913 ntBASIC12.76□□□□□ -0.37
CXCR4P61073 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.76□□□□□ -0.37
CXCR4P61073 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.76□□□□□ -0.37
CXCR4P61073 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CXCR4P61073 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 C2orf27AP3-201ENST00000434123 579 ntBASIC12.76□□□□□ -0.37
CXCR4P61073 AC002472.2-201ENST00000442739 958 ntBASIC12.76□□□□□ -0.37
CXCR4P61073 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.76□□□□□ -0.37
CXCR4P61073 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.76□□□□□ -0.37
CXCR4P61073 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.76□□□□□ -0.37
CXCR4P61073 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.76□□□□□ -0.37
CXCR4P61073 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CXCR4P61073 AP001462.1-201ENST00000594089 452 ntBASIC12.76□□□□□ -0.37
CXCR4P61073 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC12.76□□□□□ -0.37
CXCR4P61073 AL354718.3-201ENST00000616414 581 ntBASIC12.76□□□□□ -0.37
CXCR4P61073 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 CR382287.1-201ENST00000623954 586 ntBASIC12.76□□□□□ -0.37
CXCR4P61073 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.76□□□□□ -0.37
CXCR4P61073 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 AL354989.2-201ENST00000435838 1540 ntBASIC12.76□□□□□ -0.37
CXCR4P61073 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 AL645937.6-201ENST00000641122 3727 ntBASIC12.76□□□□□ -0.37
CXCR4P61073 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CXCR4P61073 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.76□□□□□ -0.37
CXCR4P61073 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CXCR4P61073 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CXCR4P61073 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CXCR4P61073 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CXCR4P61073 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CXCR4P61073 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CXCR4P61073 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CXCR4P61073 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.75□□□□□ -0.37
CXCR4P61073 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CXCR4P61073 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CXCR4P61073 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.75□□□□□ -0.37
CXCR4P61073 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
CXCR4P61073 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.75□□□□□ -0.37
CXCR4P61073 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.75□□□□□ -0.37
CXCR4P61073 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.75□□□□□ -0.37
CXCR4P61073 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.75□□□□□ -0.37
CXCR4P61073 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.75□□□□□ -0.37
CXCR4P61073 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.75□□□□□ -0.37
CXCR4P61073 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms