Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC073869.4-201ENST00000620841 800 ntBASIC13.39□□□□□ -0.27
CLDN6P56747 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CLDN6P56747 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
CLDN6P56747 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 LINC02486-201ENST00000604157 3000 ntBASIC13.39□□□□□ -0.27
CLDN6P56747 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CLDN6P56747 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.38□□□□□ -0.27
CLDN6P56747 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CLDN6P56747 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 CTSL-202ENST00000342020 933 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CLDN6P56747 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 NRADDP-201ENST00000437305 691 ntBASIC13.38□□□□□ -0.27
CLDN6P56747 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.38□□□□□ -0.27
CLDN6P56747 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 AC006116.2-201ENST00000589958 988 ntBASIC13.38□□□□□ -0.27
CLDN6P56747 AL591424.3-201ENST00000614278 872 ntBASIC13.38□□□□□ -0.27
CLDN6P56747 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.38□□□□□ -0.27
CLDN6P56747 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 AC110057.1-201ENST00000636031 898 ntBASIC13.38□□□□□ -0.27
CLDN6P56747 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CLDN6P56747 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.38□□□□□ -0.27
CLDN6P56747 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN6P56747 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CLDN6P56747 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 AC007952.5-201ENST00000572818 1486 ntBASIC13.37□□□□□ -0.27
CLDN6P56747 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDN6P56747 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC13.37□□□□□ -0.27
CLDN6P56747 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 AL512310.5-201ENST00000551999 515 ntBASIC13.37□□□□□ -0.27
CLDN6P56747 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.37□□□□□ -0.27
CLDN6P56747 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDN6P56747 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN6P56747 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms