Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 LINC00638-201ENST00000555578 2518 ntBASIC17.73■□□□□ 0.43
BRPF1P55201 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
BRPF1P55201 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BRPF1P55201 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC17.73■□□□□ 0.43
BRPF1P55201 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.73■□□□□ 0.43
BRPF1P55201 ODCP-201ENST00000459650 1639 ntBASIC17.73■□□□□ 0.43
BRPF1P55201 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BRPF1P55201 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.73■□□□□ 0.43
BRPF1P55201 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.73■□□□□ 0.43
BRPF1P55201 RPL3P2-204ENST00000413027 1203 ntBASIC17.73■□□□□ 0.43
BRPF1P55201 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 MRPL22P1-201ENST00000505398 616 ntBASIC17.73■□□□□ 0.43
BRPF1P55201 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.73■□□□□ 0.43
BRPF1P55201 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.73■□□□□ 0.43
BRPF1P55201 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.73■□□□□ 0.43
BRPF1P55201 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.73■□□□□ 0.43
BRPF1P55201 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 MIR4522-201ENST00000584932 87 ntBASIC17.73■□□□□ 0.43
BRPF1P55201 AL031673.1-201ENST00000611460 466 ntBASIC17.73■□□□□ 0.43
BRPF1P55201 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC17.73■□□□□ 0.43
BRPF1P55201 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BRPF1P55201 AC040160.2-201ENST00000623816 1675 ntBASIC17.73■□□□□ 0.43
BRPF1P55201 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRPF1P55201 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.73■□□□□ 0.43
BRPF1P55201 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BRPF1P55201 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.73■□□□□ 0.43
BRPF1P55201 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
BRPF1P55201 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRPF1P55201 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC17.72■□□□□ 0.43
BRPF1P55201 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 AC020763.3-201ENST00000625095 2904 ntBASIC17.72■□□□□ 0.43
BRPF1P55201 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.72■□□□□ 0.43
BRPF1P55201 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC17.72■□□□□ 0.43
BRPF1P55201 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.72■□□□□ 0.43
BRPF1P55201 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BRPF1P55201 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.72■□□□□ 0.43
BRPF1P55201 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
BRPF1P55201 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC17.72■□□□□ 0.43
BRPF1P55201 RN7SL81P-201ENST00000493781 261 ntBASIC17.72■□□□□ 0.43
BRPF1P55201 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.72■□□□□ 0.43
BRPF1P55201 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.72■□□□□ 0.43
BRPF1P55201 SNORD3B-1-201ENST00000577988 758 ntBASIC17.72■□□□□ 0.43
BRPF1P55201 AC005632.3-201ENST00000605544 308 ntBASIC17.72■□□□□ 0.43
BRPF1P55201 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
BRPF1P55201 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC17.72■□□□□ 0.43
BRPF1P55201 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.72■□□□□ 0.43
BRPF1P55201 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 AL122018.1-201ENST00000446607 2310 ntBASIC17.72■□□□□ 0.43
BRPF1P55201 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
BRPF1P55201 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BRPF1P55201 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BRPF1P55201 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
BRPF1P55201 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRPF1P55201 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRPF1P55201 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRPF1P55201 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BRPF1P55201 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BRPF1P55201 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.71■□□□□ 0.43
BRPF1P55201 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRPF1P55201 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRPF1P55201 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRPF1P55201 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms