Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BMP4P12644 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
BMP4P12644 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.97□□□□□ -0.33
BMP4P12644 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.97□□□□□ -0.33
BMP4P12644 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BMP4P12644 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.97□□□□□ -0.33
BMP4P12644 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BMP4P12644 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BMP4P12644 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.97□□□□□ -0.33
BMP4P12644 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BMP4P12644 MTX1P1-201ENST00000440904 838 ntBASIC12.97□□□□□ -0.33
BMP4P12644 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
BMP4P12644 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC12.97□□□□□ -0.33
BMP4P12644 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC12.97□□□□□ -0.33
BMP4P12644 AP001258.2-201ENST00000529891 490 ntBASIC12.97□□□□□ -0.33
BMP4P12644 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.97□□□□□ -0.33
BMP4P12644 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.97□□□□□ -0.33
BMP4P12644 AL133445.2-201ENST00000611191 527 ntBASIC12.97□□□□□ -0.33
BMP4P12644 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC12.97□□□□□ -0.33
BMP4P12644 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.97□□□□□ -0.33
BMP4P12644 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
BMP4P12644 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BMP4P12644 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
BMP4P12644 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
BMP4P12644 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
BMP4P12644 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
BMP4P12644 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 AC079178.1-201ENST00000420915 656 ntBASIC12.96□□□□□ -0.33
BMP4P12644 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.96□□□□□ -0.33
BMP4P12644 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.96□□□□□ -0.33
BMP4P12644 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.96□□□□□ -0.33
BMP4P12644 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.96□□□□□ -0.33
BMP4P12644 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.96□□□□□ -0.33
BMP4P12644 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC12.96□□□□□ -0.33
BMP4P12644 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.96□□□□□ -0.33
BMP4P12644 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.96□□□□□ -0.33
BMP4P12644 AL136370.1-201ENST00000608166 691 ntBASIC12.96□□□□□ -0.33
BMP4P12644 MIR6787-201ENST00000616675 61 ntBASIC12.96□□□□□ -0.33
BMP4P12644 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.96□□□□□ -0.33
BMP4P12644 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC12.96□□□□□ -0.33
BMP4P12644 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.96□□□□□ -0.33
BMP4P12644 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BMP4P12644 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.96□□□□□ -0.34
BMP4P12644 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
BMP4P12644 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
BMP4P12644 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 AC040160.2-201ENST00000623816 1675 ntBASIC12.96□□□□□ -0.34
BMP4P12644 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
BMP4P12644 AC011700.1-201ENST00000610409 2627 ntBASIC12.95□□□□□ -0.34
BMP4P12644 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BMP4P12644 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
BMP4P12644 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
BMP4P12644 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
BMP4P12644 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.95□□□□□ -0.34
BMP4P12644 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BMP4P12644 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BMP4P12644 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms