Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.86□□□□□ -0.19
COL6A2P12110 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
COL6A2P12110 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.86□□□□□ -0.19
COL6A2P12110 KRT17P8-201ENST00000540749 863 ntBASIC13.86□□□□□ -0.19
COL6A2P12110 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.86□□□□□ -0.19
COL6A2P12110 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.86□□□□□ -0.19
COL6A2P12110 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
COL6A2P12110 AC093752.3-201ENST00000567343 901 ntBASIC13.86□□□□□ -0.19
COL6A2P12110 MIR3615-201ENST00000581999 87 ntBASIC13.86□□□□□ -0.19
COL6A2P12110 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL6A2P12110 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.86□□□□□ -0.19
COL6A2P12110 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.86□□□□□ -0.19
COL6A2P12110 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL6A2P12110 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL6A2P12110 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.86□□□□□ -0.19
COL6A2P12110 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL6A2P12110 PCDHB18P-202ENST00000526308 3197 ntBASIC13.86□□□□□ -0.19
COL6A2P12110 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL6A2P12110 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL6A2P12110 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
COL6A2P12110 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL6A2P12110 AF013593.1-201ENST00000458074 1487 ntBASIC13.86□□□□□ -0.19
COL6A2P12110 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.86□□□□□ -0.19
COL6A2P12110 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.86□□□□□ -0.19
COL6A2P12110 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
COL6A2P12110 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
COL6A2P12110 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.85□□□□□ -0.19
COL6A2P12110 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COL6A2P12110 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 AC004899.1-201ENST00000424687 1714 ntBASIC13.85□□□□□ -0.19
COL6A2P12110 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.85□□□□□ -0.19
COL6A2P12110 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COL6A2P12110 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
COL6A2P12110 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.85□□□□□ -0.19
COL6A2P12110 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.85□□□□□ -0.19
COL6A2P12110 AC005034.1-201ENST00000426657 489 ntBASIC13.85□□□□□ -0.19
COL6A2P12110 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.85□□□□□ -0.19
COL6A2P12110 RNMTL1P1-201ENST00000454103 560 ntBASIC13.85□□□□□ -0.19
COL6A2P12110 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.85□□□□□ -0.19
COL6A2P12110 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.85□□□□□ -0.19
COL6A2P12110 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 RN7SL455P-201ENST00000580629 282 ntBASIC13.85□□□□□ -0.19
COL6A2P12110 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COL6A2P12110 AC012645.4-201ENST00000610691 1061 ntBASIC13.85□□□□□ -0.19
COL6A2P12110 AL035252.4-201ENST00000624174 288 ntBASIC13.85□□□□□ -0.19
COL6A2P12110 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.85□□□□□ -0.19
COL6A2P12110 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.85□□□□□ -0.19
COL6A2P12110 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.85□□□□□ -0.19
COL6A2P12110 BRD7P5-201ENST00000299197 1822 ntBASIC13.85□□□□□ -0.19
COL6A2P12110 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COL6A2P12110 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL6A2P12110 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.85□□□□□ -0.19
COL6A2P12110 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 PCDHA6-201ENST00000378126 3267 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
COL6A2P12110 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
COL6A2P12110 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
COL6A2P12110 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.84□□□□□ -0.19
COL6A2P12110 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 AC060814.4-201ENST00000594169 2163 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 AGGF1P10-201ENST00000635005 2191 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms