Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3P10147 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3P10147 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3P10147 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3P10147 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3P10147 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3P10147 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL3P10147 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL3P10147 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL3P10147 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CCL3P10147 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CCL3P10147 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3P10147 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL3P10147 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL3P10147 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3P10147 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
CCL3P10147 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL3P10147 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL3P10147 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL3P10147 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL3P10147 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL3P10147 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL3P10147 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CCL3P10147 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL3P10147 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3P10147 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CCL3P10147 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL3P10147 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 OR7E115P-201ENST00000382617 1024 ntBASIC12.67□□□□□ -0.38
CCL3P10147 DKKL1P1-201ENST00000400550 698 ntBASIC12.67□□□□□ -0.38
CCL3P10147 GGTLC4P-201ENST00000402176 664 ntBASIC12.67□□□□□ -0.38
CCL3P10147 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3P10147 ACTG1P19-201ENST00000418987 1116 ntBASIC12.67□□□□□ -0.38
CCL3P10147 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3P10147 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3P10147 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL3P10147 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3P10147 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL3P10147 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CCL3P10147 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3P10147 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 AL132780.4-201ENST00000624870 1135 ntBASIC12.67□□□□□ -0.38
CCL3P10147 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3P10147 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3P10147 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 SALL4P6-201ENST00000429385 1691 ntBASIC12.67□□□□□ -0.38
CCL3P10147 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3P10147 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CCL3P10147 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL3P10147 AC020763.3-201ENST00000625095 2904 ntBASIC12.66□□□□□ -0.38
CCL3P10147 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL3P10147 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 AC023794.5-201ENST00000564380 2157 ntBASIC12.66□□□□□ -0.38
CCL3P10147 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL3P10147 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL3P10147 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3P10147 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms