Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC1P02654 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 AGAP10P-201ENST00000454844 2418 ntBASIC12.48□□□□□ -0.41
APOC1P02654 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
APOC1P02654 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
APOC1P02654 KRT8P29-201ENST00000420409 1371 ntBASIC12.48□□□□□ -0.41
APOC1P02654 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 AC063926.2-201ENST00000623766 1308 ntBASIC12.48□□□□□ -0.41
APOC1P02654 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.48□□□□□ -0.41
APOC1P02654 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.48□□□□□ -0.41
APOC1P02654 CSF2RBP1-201ENST00000447905 391 ntBASIC12.48□□□□□ -0.41
APOC1P02654 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.48□□□□□ -0.41
APOC1P02654 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.48□□□□□ -0.41
APOC1P02654 AL160314.3-201ENST00000556041 767 ntBASIC12.48□□□□□ -0.41
APOC1P02654 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.48□□□□□ -0.41
APOC1P02654 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 LINC02084-201ENST00000606069 1096 ntBASIC12.48□□□□□ -0.41
APOC1P02654 AC133552.6-201ENST00000613406 534 ntBASIC12.48□□□□□ -0.41
APOC1P02654 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
APOC1P02654 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 AL357140.3-201ENST00000639753 1983 ntBASIC12.48□□□□□ -0.41
APOC1P02654 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC1P02654 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC1P02654 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC1P02654 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC1P02654 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
APOC1P02654 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
APOC1P02654 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
APOC1P02654 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOC1P02654 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.47□□□□□ -0.41
APOC1P02654 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
APOC1P02654 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms