Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC061965.1-201ENST00000560524 1465 ntBASIC14.26□□□□□ -0.13
CCDC78A2IDD5 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 RNA5SP359-201ENST00000364838 113 ntBASIC14.26□□□□□ -0.13
CCDC78A2IDD5 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 TSPY25P-201ENST00000429463 745 ntBASIC14.26□□□□□ -0.13
CCDC78A2IDD5 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 AC020658.7-201ENST00000624274 2442 ntBASIC14.26□□□□□ -0.13
CCDC78A2IDD5 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 AC004623.1-201ENST00000624592 2127 ntBASIC14.26□□□□□ -0.13
CCDC78A2IDD5 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC78A2IDD5 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 RCC2P1-201ENST00000452257 1476 ntBASIC14.25□□□□□ -0.13
CCDC78A2IDD5 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 LINC01815-202ENST00000641468 1409 ntBASIC14.25□□□□□ -0.13
CCDC78A2IDD5 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 AC103592.1-201ENST00000394513 664 ntBASIC14.25□□□□□ -0.13
CCDC78A2IDD5 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 RPS9P1-201ENST00000419943 583 ntBASIC14.25□□□□□ -0.13
CCDC78A2IDD5 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 AK2P2-201ENST00000439142 405 ntBASIC14.25□□□□□ -0.13
CCDC78A2IDD5 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 KRT18P15-201ENST00000458108 1291 ntBASIC14.25□□□□□ -0.13
CCDC78A2IDD5 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 MIR3615-201ENST00000581999 87 ntBASIC14.25□□□□□ -0.13
CCDC78A2IDD5 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 AL132994.2-201ENST00000603120 687 ntBASIC14.25□□□□□ -0.13
CCDC78A2IDD5 AL022328.3-201ENST00000607943 679 ntBASIC14.25□□□□□ -0.13
CCDC78A2IDD5 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC78A2IDD5 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms