Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 AC098935.1-201ENST00000446057 611 ntBASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 RN7SL665P-201ENST00000578793 300 ntBASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 RN7SL455P-201ENST00000580629 282 ntBASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 COX6A1P2-201ENST00000620597 330 ntBASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.65■□□□□ 0.1
COL4A3BPQ9Y5P4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.1
COL4A3BPQ9Y5P4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL4A3BPQ9Y5P4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL4A3BPQ9Y5P4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
COL4A3BPQ9Y5P4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 AL512306.1-201ENST00000432698 848 ntBASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 AC087392.5-201ENST00000612517 489 ntBASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 AC009145.4-201ENST00000625119 1294 ntBASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.64■□□□□ 0.09
COL4A3BPQ9Y5P4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AP002803.1-201ENST00000528836 498 ntBASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC138701.2-201ENST00000553634 226 ntBASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms