Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 MIR1307-201ENST00000408840 149 ntBASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 RPL13AP19-201ENST00000434320 584 ntBASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 AC093300.1-201ENST00000510368 1201 ntBASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 AL009176.1-201ENST00000607876 650 ntBASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 AL118522.1-201ENST00000611368 560 ntBASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 AC138466.4-201ENST00000623965 852 ntBASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 AL451007.2-201ENST00000632004 563 ntBASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.17■□□□□ 0.18
CTDP1Q9Y5B0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 AP000354.1-201ENST00000396982 456 ntBASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 AL627389.1-201ENST00000413508 1182 ntBASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 BCAS2P2-201ENST00000425064 674 ntBASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 AL031673.1-201ENST00000611460 466 ntBASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 AC127024.7-201ENST00000625101 200 ntBASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.16■□□□□ 0.18
CTDP1Q9Y5B0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms