Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR1DQ9Y2S0 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 KRT18P36-201ENST00000411618 1276 ntBASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 BNIP3P42-201ENST00000454982 569 ntBASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 BNIP3P29-201ENST00000598302 571 ntBASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 AC007663.3-201ENST00000609632 465 ntBASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 AC011447.5-201ENST00000616168 564 ntBASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
POLR1DQ9Y2S0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
POLR1DQ9Y2S0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.58□□□□□ -0.39
POLR1DQ9Y2S0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
POLR1DQ9Y2S0 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.58□□□□□ -0.39
POLR1DQ9Y2S0 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
POLR1DQ9Y2S0 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
POLR1DQ9Y2S0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 ATP5G2P4-201ENST00000442175 420 ntBASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 RPL13AP20-201ENST00000459725 609 ntBASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 RNA5SP412-201ENST00000516234 123 ntBASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms