Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 AL139400.1-201ENST00000366220 510 ntBASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 AC009078.2-202ENST00000463353 338 ntBASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 AL138828.2-201ENST00000615812 383 ntBASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 FKBP4P6-201ENST00000457486 1332 ntBASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 AL845472.1-202ENST00000624675 4080 ntBASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 MSTO2P-201ENST00000314835 1709 ntBASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX1-2Q9UD57 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 CCT8L1P-201ENST00000465400 1674 ntBASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 HERC2P10-201ENST00000570209 2393 ntBASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 AL358472.5-202ENST00000641448 1267 ntBASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX1-2Q9UD57 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX1-2Q9UD57 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX1-2Q9UD57 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX1-2Q9UD57 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
NKX1-2Q9UD57 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX1-2Q9UD57 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX1-2Q9UD57 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX1-2Q9UD57 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms