Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC012362.1-201ENST00000434906 739 ntBASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 RN7SL375P-201ENST00000492442 298 ntBASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 PRSS3P1-201ENST00000503996 742 ntBASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 MIR4750-201ENST00000584564 56 ntBASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 AL049840.2-201ENST00000602722 535 ntBASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 AL359091.4-201ENST00000610052 409 ntBASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 MIR6727-201ENST00000620702 65 ntBASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 CR392039.2-201ENST00000623182 509 ntBASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 AC025183.3-201ENST00000623526 1482 ntBASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 AC073548.1-201ENST00000624088 1882 ntBASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 NCLP1-201ENST00000445357 1963 ntBASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HMG20BQ9P0W2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 MARK2P9-201ENST00000430958 1727 ntBASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMG20BQ9P0W2 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms