Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 AC012645.4-201ENST00000610691 1061 ntBASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 AF013593.1-201ENST00000458074 1487 ntBASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 AC005324.6-201ENST00000587972 613 ntBASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHACTR1Q9C0D0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 MEX3B-202ENST00000558133 4333 ntBASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PHACTR1Q9C0D0 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms