Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 PGAM1P12-201ENST00000505622 748 ntBASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 TBC1D27-202ENST00000424239 1573 ntBASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.68□□□□□ -0.06
SHKBP1Q8TBC3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AC138761.6-201ENST00000583997 1423 ntBASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AL359881.3-201ENST00000602640 1721 ntBASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 RN7SKP155-201ENST00000516031 288 ntBASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AL132994.1-201ENST00000554098 400 ntBASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 FO393412.1-201ENST00000619841 382 ntBASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 AC073592.2-201ENST00000623062 780 ntBASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.67□□□□□ -0.06
SHKBP1Q8TBC3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms