Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 AC008622.3-201ENST00000621170 600 ntBASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 AC008038.1-201ENST00000634247 1314 ntBASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 HLF-202ENST00000430986 1385 ntTSL 2 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 AC020763.3-201ENST00000625095 2904 ntBASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 LINC00552-201ENST00000625151 2579 ntBASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 FAU-201ENST00000279259 461 ntTSL 2 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 RN7SL440P-201ENST00000577855 343 ntBASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 SNX20-205ENST00000610485 557 ntTSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 CR392039.2-201ENST00000623182 509 ntBASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 AC005865.2-202ENST00000635814 725 ntBASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 AL596257.1-201ENST00000641463 2694 ntBASIC15.1■□□□□ 0.01
KLHDC9Q8NEP7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 BX640514.1-201ENST00000583223 1918 ntBASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 AC015656.1-201ENST00000624209 3578 ntBASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 AL390755.1-201ENST00000623716 2027 ntBASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KLHDC9Q8NEP7 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms