Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 TUBA3GP-201ENST00000410028 1325 ntBASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 AC124944.3-201ENST00000607976 1304 ntBASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 AL031590.1-202ENST00000641466 1737 ntBASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 MIR766-201ENST00000390223 111 ntBASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 SPTLC1P3-201ENST00000403408 259 ntBASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 RFNG-202ENST00000429557 994 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 AC133555.4-201ENST00000569081 152 ntBASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 CCND3P2-201ENST00000579393 537 ntBASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 AL049840.2-201ENST00000602722 535 ntBASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 AC091905.3-201ENST00000624959 234 ntBASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RSPO4Q2I0M5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 SFPQP1-201ENST00000446621 1786 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 TUBB8P9-201ENST00000422534 1276 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 TUBB8P10-201ENST00000430210 1279 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 FAM213AP2-201ENST00000521579 683 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 RPL30-213ENST00000523172 274 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 MIR4459-201ENST00000581837 66 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 MIR4309-201ENST00000582498 83 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 FAM223B-202ENST00000598177 713 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 MIR8071-1-201ENST00000616769 65 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 MIR8071-2-201ENST00000616772 65 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 AC010335.3-201ENST00000623767 531 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 FAM223A-202ENST00000625204 713 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 AC245369.8-201ENST00000636589 306 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 CICP23-201ENST00000605013 2741 ntBASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms