Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
ASIC1P78348 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ASIC1P78348 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ASIC1P78348 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 CYP46A4P-201ENST00000414953 267 ntBASIC15.65■□□□□ 0.1
ASIC1P78348 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.65■□□□□ 0.1
ASIC1P78348 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ASIC1P78348 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.65■□□□□ 0.1
ASIC1P78348 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.65■□□□□ 0.1
ASIC1P78348 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.65■□□□□ 0.1
ASIC1P78348 AL021707.6-201ENST00000609212 491 ntBASIC15.65■□□□□ 0.1
ASIC1P78348 MIR6869-201ENST00000619434 62 ntBASIC15.65■□□□□ 0.1
ASIC1P78348 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ASIC1P78348 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.65■□□□□ 0.1
ASIC1P78348 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.65■□□□□ 0.1
ASIC1P78348 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ASIC1P78348 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ASIC1P78348 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.64■□□□□ 0.1
ASIC1P78348 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.64■□□□□ 0.09
ASIC1P78348 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ASIC1P78348 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 AC107918.4-201ENST00000641966 3141 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.64■□□□□ 0.09
ASIC1P78348 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ASIC1P78348 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 AC005252.3-201ENST00000623855 2258 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.64■□□□□ 0.09
ASIC1P78348 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
ASIC1P78348 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 SNORA50C-201ENST00000408535 133 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 BX679664.3-201ENST00000414070 555 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.64■□□□□ 0.09
ASIC1P78348 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.64■□□□□ 0.09
ASIC1P78348 AC113935.1-201ENST00000471722 555 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.64■□□□□ 0.09
ASIC1P78348 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.64■□□□□ 0.09
ASIC1P78348 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 MEG3_2.1-201ENST00000611456 105 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 AC091544.8-201ENST00000619490 361 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 MIR6799-201ENST00000620297 69 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 AC079336.7-201ENST00000623428 1078 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 AC100757.4-201ENST00000626934 759 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 SNORA50.1-201ENST00000628590 135 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ASIC1P78348 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.64■□□□□ 0.09
ASIC1P78348 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 TUBBP5-203ENST00000508529 1334 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 AL445250.1-201ENST00000641671 2259 ntBASIC15.64■□□□□ 0.09
ASIC1P78348 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.64■□□□□ 0.09
ASIC1P78348 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ASIC1P78348 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ASIC1P78348 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC15.63■□□□□ 0.09
ASIC1P78348 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ASIC1P78348 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.63■□□□□ 0.09
ASIC1P78348 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ASIC1P78348 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
ASIC1P78348 TCAF1P1-201ENST00000414990 2232 ntBASIC15.63■□□□□ 0.09
ASIC1P78348 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ASIC1P78348 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ASIC1P78348 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ASIC1P78348 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.63■□□□□ 0.09
ASIC1P78348 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms