Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.39□□□□□ -0.43
SEC61A1P61619 MIR663B-201ENST00000408361 115 ntBASIC12.39□□□□□ -0.43
SEC61A1P61619 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.39□□□□□ -0.43
SEC61A1P61619 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SEC61A1P61619 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.39□□□□□ -0.43
SEC61A1P61619 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.39□□□□□ -0.43
SEC61A1P61619 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.39□□□□□ -0.43
SEC61A1P61619 MIR3615-201ENST00000581999 87 ntBASIC12.39□□□□□ -0.43
SEC61A1P61619 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC61A1P61619 AL022328.3-201ENST00000607943 679 ntBASIC12.39□□□□□ -0.43
SEC61A1P61619 AL136301.1-201ENST00000615830 422 ntBASIC12.39□□□□□ -0.43
SEC61A1P61619 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SEC61A1P61619 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC61A1P61619 AC107375.1-201ENST00000564464 2231 ntBASIC12.39□□□□□ -0.43
SEC61A1P61619 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC61A1P61619 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SEC61A1P61619 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SEC61A1P61619 AC215219.1-201ENST00000400706 1817 ntBASIC12.39□□□□□ -0.43
SEC61A1P61619 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
SEC61A1P61619 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC61A1P61619 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC61A1P61619 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 MRPL37P1-201ENST00000592451 1337 ntBASIC12.38□□□□□ -0.43
SEC61A1P61619 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 CSPG4P11-201ENST00000560634 4910 ntBASIC12.38□□□□□ -0.43
SEC61A1P61619 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
SEC61A1P61619 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.38□□□□□ -0.43
SEC61A1P61619 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.38□□□□□ -0.43
SEC61A1P61619 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SEC61A1P61619 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.38□□□□□ -0.43
SEC61A1P61619 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SEC61A1P61619 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.38□□□□□ -0.43
SEC61A1P61619 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 GPAA1P2-201ENST00000417923 928 ntBASIC12.38□□□□□ -0.43
SEC61A1P61619 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.38□□□□□ -0.43
SEC61A1P61619 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.38□□□□□ -0.43
SEC61A1P61619 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.38□□□□□ -0.43
SEC61A1P61619 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.38□□□□□ -0.43
SEC61A1P61619 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.38□□□□□ -0.43
SEC61A1P61619 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 AL031719.1-201ENST00000623365 2587 ntBASIC12.38□□□□□ -0.43
SEC61A1P61619 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.38□□□□□ -0.43
SEC61A1P61619 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SEC61A1P61619 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
SEC61A1P61619 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SEC61A1P61619 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.38□□□□□ -0.43
SEC61A1P61619 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.38□□□□□ -0.43
SEC61A1P61619 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC61A1P61619 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SEC61A1P61619 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC61A1P61619 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SEC61A1P61619 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC61A1P61619 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC61A1P61619 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC61A1P61619 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC61A1P61619 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SEC61A1P61619 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SEC61A1P61619 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms