Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 KRT18P62-201ENST00000446618 1287 ntBASIC12.49□□□□□ -0.41
GFRA1P56159 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
GFRA1P56159 RN7SL23P-201ENST00000484055 275 ntBASIC12.49□□□□□ -0.41
GFRA1P56159 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.49□□□□□ -0.41
GFRA1P56159 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
GFRA1P56159 IGHV3-37-201ENST00000518544 340 ntBASIC12.49□□□□□ -0.41
GFRA1P56159 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.49□□□□□ -0.41
GFRA1P56159 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.49□□□□□ -0.41
GFRA1P56159 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
GFRA1P56159 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.49□□□□□ -0.41
GFRA1P56159 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.49□□□□□ -0.41
GFRA1P56159 AC002044.2-201ENST00000624910 970 ntBASIC12.49□□□□□ -0.41
GFRA1P56159 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.49□□□□□ -0.41
GFRA1P56159 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
GFRA1P56159 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
GFRA1P56159 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.49□□□□□ -0.41
GFRA1P56159 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
GFRA1P56159 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.48□□□□□ -0.41
GFRA1P56159 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.48□□□□□ -0.41
GFRA1P56159 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 AC023794.5-201ENST00000564380 2157 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 AC106827.1-201ENST00000366454 431 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.48□□□□□ -0.41
GFRA1P56159 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 SNORA50C-201ENST00000408535 133 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.48□□□□□ -0.41
GFRA1P56159 ACTG1P19-201ENST00000418987 1116 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 EEF1GP8-201ENST00000506566 1154 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 AC100858.1-201ENST00000514059 1228 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.48□□□□□ -0.41
GFRA1P56159 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.48□□□□□ -0.41
GFRA1P56159 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.48□□□□□ -0.41
GFRA1P56159 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.48□□□□□ -0.41
GFRA1P56159 AC226150.1-201ENST00000544259 466 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 VENTXP3-201ENST00000546480 773 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.48□□□□□ -0.41
GFRA1P56159 MIR3940-201ENST00000579148 102 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
GFRA1P56159 U62317.3-201ENST00000608319 855 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 AP001065.2-201ENST00000617205 644 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 SNORA50.1-201ENST00000628590 135 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
GFRA1P56159 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 GRK6P1-201ENST00000400595 1711 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 AL359881.3-201ENST00000602640 1721 ntBASIC12.48□□□□□ -0.41
GFRA1P56159 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.48□□□□□ -0.41
GFRA1P56159 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFRA1P56159 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms